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Banc-Bot Guide
Welcome to the BANC! We’re happy you’ve decided to join us to begin proofreading in the GNG (Gnathal Ganglia) of fruit fly brain and nerve cord! If you’re coming from Eyewire, or even if you are a seasoned Flyer, with this dataset we’ll be tracking progress a little differently. We’ll be using a little friend called…
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BANC Proofreading 101: Climb into Spelunker
Spelunker is the latest neuroglancer platform for proofreading and annotating large electron microscopy datasets. Whether you’re brand new to proofreading or or need some guidance while getting acquainted with the updated platform, this tutorial will help get going.
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Expert Proofreading Tips for the BANC (Brain and Nerve Cord) Dataset
Here are some proofreading tips specific to the BANC (Brain and Nerve Cord) dataset in FlyWire. Using Mitochondria For Continuations For this particular dataset, you may often find that the dark mitochondria in a branch cause the AI to grow confused and terminate the branch instead of finding the extension. However, although most mitochondria don’t…
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How to find photoreceptors to proofread and label
Big thanks to FlyWire team member Szi-chieh for putting together this guide for finding photoreceptors! Introduction Drosophila has two chief motion detection pathways (reference): Since we have all Mi1 cells labeled in the left hemisphere, based on the motion detection pathways, we can work our way up using an individual Mi1 to locate its presynaptic…
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Quest for the missing Photoreceptors (R cells)!
Calling all Flyers to a new quest! We’re on the hunt for unlabeled retinula cells, and we need your help to complete them! These photoreceptors extend into the retina, whereas our dataset terminates at the lamina. Therefore, it will not be possible to fully complete these cells, though we can observe large enough sections for…
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Cell Labeling/Adding Annotations
Proofreading cells is one of our main objectives in FlyWire. But as we near completion on the Fly connectome, we also need help labeling proofread cells, sometimes also referred to as cell annotation. This guide will get you started on your cell annotation journey, and provide resources to helpful tools that can assist in leveling…
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To trace, or not to trace? How to know when your cell is finished
How perfect is too perfect? Let’s go over some tricks and tips to decide when it’s time to stop proofreading.
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FlyWire Help: What will my cell look like?
Take a look at the morphology of cells in the optical column, the area of the fly brain we are reconstructing.
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Glossary of fly ultrastructure and morphology
A visual glossary of fly neuroanatomy.